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Carlos Oliver

2 accepted papers

2023

ProteinShake: Building datasets and benchmarks for deep learning on protein structures

NeurIPS 2023poster

We present ProteinShake, a Python software package that simplifies dataset creation and model evaluation for deep learning on protein structures. Users can create custom datasets or load an extensive set of pre-processed datasets from biological data repositories such as the Protein Data Bank (PDB)…

Cited by 12SourcePDFScholar
2023

Unsupervised Manifold Alignment with Joint Multidimensional Scaling

ICLR 2023poster

We introduce Joint Multidimensional Scaling, a novel approach for unsupervised manifold alignment, which maps datasets from two different domains, without any known correspondences between data instances across the datasets, to a common low-dimensional Euclidean space. Our approach integrates Multid…