16 accepted papers
Understanding potential selection in data is crucial for causal discovery; we argue that "selection" in common narratives takes two forms, which we term _static_ and _evolutionary_ selection, respectively. Static selection refers to a one-shot filtering process where observed data consist of a _subs…
Interventional causal discovery seeks to identify causal relations by leveraging distributional changes introduced by interventions, even in the presence of latent confounders. Beyond the spurious dependencies induced by latent confounders, we highlight a common yet often overlooked challenge in the…
Identifying latent variables and their induced causal structure is fundamental in various scientific fields. Existing approaches often rely on restrictive structural assumptions (e.g., purity) and may become invalid when these assumptions are violated. We introduce Conditional Independent Component…
Causal discovery with latent variables is a fundamental task. Yet most existing methods rely on strong structural assumptions, such as enforcing specific indicator patterns for latents or restricting how they can interact with others. We argue that a core obstacle to a general, structural-assumption…
Estimating causal structure in the presence of latent variables is an important yet challenging problem. Recent works have shown that distributional constraints, such as rank deficiency constraints of the covariance matrices, can be exploited to recover the underlying causal structure involving late…
Identifying the structure of a partially observed causal system is essential to various scientific fields. Recent advances have focused on constraint-based causal discovery to solve this problem, and yet in practice these methods often face challenges related to multiple testing and error propagatio…
Gene regulatory network inference (GRNI) aims to discover how genes causally regulate each other from gene expression data. It is well-known that statistical dependencies in observed data do not necessarily imply causation, as spurious dependencies may arise from *latent confounders*, such as non-co…
Addressing selection bias in latent variable causal discovery is important yet underexplored, largely due to a lack of suitable statistical tools: While various tools beyond basic conditional independencies have been developed to handle latent variables, none have been adapted for selection bias. We…
Recent advances have shown that statistical tests for the rank of cross-covariance matrices play an important role in causal discovery. These rank tests include partial correlation tests as special cases and provide further graphical information about latent variables. Existing rank tests typically…
Knowledge graphs serve as critical resources supporting intelligent systems, but they can be noisy due to imperfect automatic generation processes. Existing approaches to noise detection often rely on external facts, logical rule constraints, or structural embeddings. These methods are often challen…
We address the common yet often-overlooked selection bias in interventional studies, where subjects are selectively enrolled into experiments. For instance, participants in a drug trial are usually patients of the relevant disease; A/B tests on mobile applications target existing users only, and gen…
Gene regulatory network inference (GRNI) is a challenging problem, particularly owing to the presence of zeros in single-cell RNA sequencing data: some are biological zeros representing no gene expression, while some others are technical zeros arising from the sequencing procedure (aka dropouts), wh…
Local causal discovery is of great practical significance, as there are often situations where the discovery of the global causal structure is unnecessary, and the interest lies solely on a single target variable. Most existing local methods utilize conditional independence relations, providing only…
Many causal discovery methods typically rely on the assumption of independent noise, yet real-life situations often involve deterministic relationships. In these cases, observed variables are represented as deterministic functions of their parental variables without noise. When determinism is presen…
Identifying latent variables and the causal structure involving them is essential across various scientific fields. While many existing works fall under the category of constraint-based methods (with e.g. conditional independence or rank deficiency tests), they may face empirical challenges such as…
Causal discovery aims to recover causal structures generating the observational data. Despite its success in certain problems, in many real-world scenarios the observed variables are not the target variables of interest, but the imperfect measures of the target variables. Causal discovery under meas…