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Jose Pablo Folch

4 accepted papers

2025

BARK: A Fully Bayesian Tree Kernel for Black-box Optimization

ICML 2025poster

We perform Bayesian optimization using a Gaussian process perspective on Bayesian Additive Regression Trees (BART). Our BART Kernel (BARK) uses tree agreement to define a posterior over piecewise-constant functions, and we explore the space of tree kernels using a Markov chain Monte Carlo approach.…

Cited by 0SourcePDFScholar
2025

The Catechol Benchmark: Time-series Solvent Selection Data for Few-shot Machine Learning

NeurIPS 2025poster

Machine learning has promised to change the landscape of laboratory chemistry, with impressive results in molecular property prediction and reaction retro-synthesis. However, chemical datasets are often inaccessible to the machine learning community as they tend to require cleaning, thorough underst…

Cited by 0SourcecodeScholar
2024

Transition Constrained Bayesian Optimization via Markov Decision Processes

NeurIPS 2024poster

Bayesian optimization is a methodology to optimize black-box functions. Traditionally, it focuses on the setting where you can arbitrarily query the search space. However, many real-life problems do not offer this flexibility; in particular, the search space of the next query may depend on previous…

Cited by 5SourcePDFScholar
2022

SnAKe: Bayesian Optimization with Pathwise Exploration

NeurIPS 2022accept

"Bayesian Optimization is a very effective tool for optimizing expensive black-box functions. Inspired by applications developing and characterizing reaction chemistry using droplet microfluidic reactors, we consider a novel setting where the expense of evaluating the function can increase significa…

Cited by 20SourcePDFScholar