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Mujie Lin

3 accepted papers

2026

BioDynaSpec: Harmonic-Guided Spatio-Spectral Autoregressive Diffusion for Protein Dynamics Generation

ICML 2026poster

Generating long-horizon, all-atom molecular dynamics (MD) is difficult due to error accumulation in time-domain autoregressive models (causing drift) and fixed step-size constraints on temporal resolution. We propose **BioDynaSpec**, which reformulates protein dynamics as spatio-spectral generation:…

Cited by 0SourceScholar
2026

ProAR: Probabilistic Autoregressive Modeling for Molecular Dynamics

AAAI 2026technical

Understanding the structural dynamics of biomolecules is crucial for uncovering biological functions. As molecular dynamics (MD) simulation data becomes more available, deep generative models have been developed to synthesize realistic MD trajectories. However, existing methods produce fixed-length

Cited by 0SourcePDFScholar
2025

SciAssess: Benchmarking LLM Proficiency in Scientific Literature Analysis

NAACL 2025findings

Recent breakthroughs in Large Language Models (LLMs) have revolutionized scientific literature analysis. However, existing benchmarks fail to adequately evaluate the proficiency of LLMs in this domain, particularly in scenarios requiring higher-level abilities beyond mere memorization and the handli…