Runze Ma — accepted AI-conference papers

2026

VCWorld: A Biological World Model for Virtual Cell Simulation

Zhijian Wei, Runze Ma, Zichen Wang, Zhongmin Li, Shuotong Song, Shuangjia Zheng

ICLR 2026poster

Virtual cell modeling aims to predict cellular responses to perturbations. Existing virtual cell models rely heavily on large-scale single-cell datasets, learning explicit mappings between gene expression and perturbations. Although recent models attempt to incorporate multi-source biological inform…

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2025

RiboFlow: Conditional De Novo RNA Co-Design via Synergistic Flow Matching

Runze Ma, Zhongyue Zhang, Zichen Wang, Will Hua, Jiahua Rao, Zhuomin Zhou +1

NeurIPS 2025poster

Ribonucleic acid (RNA) binds to molecules to achieve specific biological functions. While generative models are advancing biomolecule design, existing methods for designing RNA that target specific ligands face limitations in capturing RNA’s conformational flexibility, ensuring structural validity,…

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