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Shahira Abousamra

9 accepted papers

2026

Act Like a Pathologist: Tissue-Aware Whole Slide Image Reasoning

CVPR 2026

Computational pathology has advanced rapidly in recent years, driven by domain-specific image encoders and growing interest in using vision-language models to answer natural-language questions about diseases. Yet, the core problem behind pathology question-answering remains unsolved, considering tha

Cited by 0SourcecodeScholar
2026

TopoSlide: Topologically-Informed Histopathology Whole Slide Image Representation Learning

CVPR 2026

Histopathology whole slide images (WSIs) are gigapixel images that present significant challenges in generating effective representations that capture both local histological features and their global spatial organization. Current pathology foundation models focus primarily on local patch-level feat

Cited by 0SourcecodeScholar
2025

MATCH: Multi-faceted Adaptive Topo-Consistency for Semi-Supervised Histopathology Segmentation

NeurIPS 2025poster

In semi-supervised segmentation, capturing meaningful semantic structures from unlabeled data is essential. This is particularly challenging in histopathology image analysis, where objects are densely distributed. To address this issue, we propose a semi-supervised segmentation framework designed to…

Cited by 0SourcecodeScholar
2025

TopoCellGen: Generating Histopathology Cell Topology with a Diffusion Model

CVPR 2025poster

Accurately modeling multi-class cell topology is crucial in digital pathology, as it provides critical insights into tissue structure and pathology. The synthetic generation of cell topology enables realistic simulations of complex tissue environments, enhances downstream tasks by augmenting trainin…

2024

Semi-supervised Segmentation of Histopathology Images with Noise-Aware Topological Consistency

ECCV 2024poster

"In digital pathology, segmenting densely distributed objects like glands and nuclei is crucial for downstream analysis. Since detailed pixel-wise annotations are very time-consuming, we need semi-supervised segmentation methods that can learn from unlabeled images. Existing semi-supervised methods…

2023

Topology-Guided Multi-Class Cell Context Generation for Digital Pathology

CVPR 2023poster

In digital pathology, the spatial context of cells is important for cell classification, cancer diagnosis and prognosis. To model such complex cell context, however, is challenging. Cells form different mixtures, lineages, clusters and holes. To model such structural patterns in a learnable fashion,…

Cited by 15SourcePDFScholar
2021

Localization in the Crowd with Topological Constraints

AAAI 2021technical

We address the problem of crowd localization, i.e., the prediction of dots corresponding to people in a crowded scene. Due to various challenges, a localization method is prone to spatial semantic errors, i.e., predicting multiple dots within a same person or collapsing multiple dots in a cluttered…

2021

Multi-Class Cell Detection Using Spatial Context Representation

ICCV 2021poster

In digital pathology, both detection and classification of cells are important for automatic diagnostic and prognostic tasks. Classifying cells into subtypes, such as tumor cells, lymphocytes or stromal cells is particularly challenging. Existing methods focus on morphological appearance of individu…

Cited by 42PDFcodeScholar