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Stefanie Speidel

7 accepted papers

2026

HistoPrism: Unlocking Functional Pathway Analysis from Pan-Cancer Histology via Gene Expression Prediction

ICLR 2026poster

Predicting spatial gene expression from H\&E histology offers a scalable and clinically accessible alternative to sequencing, but realizing clinical impact requires models that generalize across cancer types and capture biologically coherent signals. Prior work is often limited to per-cancer setting…

Cited by 0SourcecodeScholar
2025

Three-Dimensional Anatomical Data Generation Based on Artificial Neural Networks

IROS 2025

Surgical planning and training based on machine learning requires a large amount of 3D anatomical models reconstructed from medical imaging, which is currently one of the major bottlenecks. Obtaining these data from real patients and during surgery is very demanding, if even possible, due to legal,

Cited by 0SourceScholar
2025

Vibration-Based Energy Metric for Restoring Needle Alignment in Autonomous Robotic Ultrasound

IROS 2025

Precise needle alignment is essential for percutaneous needle insertion in robotic ultrasound-guided procedures. However, inherent challenges such as speckle noise, needle-like artifacts, and low image resolution complicate robust needle detection, which is essential for alignment in ultrasound imag

Cited by 0SourceScholar
2023

Why Is the Winner the Best?

CVPR 2023poster

International benchmarking competitions have become fundamental for the comparative performance assessment of image analysis methods. However, little attention has been given to investigating what can be learnt from these competitions. Do they really generate scientific progress? What are common and…

Cited by 29SourcePDFScholar
2021

Data-Driven Intra-Operative Estimation of Anatomical Attachments for Autonomous Tissue Dissection

RA-L 2021

The execution of surgical tasks by an Autonomous Robotic System (ARS) requires an up-to-date model of the current surgical environment, which has to be deduced from measurements collected during task execution. In this work, we propose to automate tissue dissection tasks by introducing a convolution

Cited by 18SourceScholar
2021

Long-Term Temporally Consistent Unpaired Video Translation From Simulated Surgical 3D Data

ICCV 2021poster

Research in unpaired video translation has mainly focused on short-term temporal consistency by conditioning on neighboring frames. However for transfer from simulated to photorealistic sequences, available information on the underlying geometry offers potential for achieving global consistency acro…

Cited by 34PDFcodeScholar