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Xiangtao Li

3 accepted papers

2024

Unsupervised Gene-Cell Collective Representation Learning with Optimal Transport

AAAI 2024technical

Cell type identification plays a vital role in single-cell RNA sequencing (scRNA-seq) data analysis. Although many deep embedded methods to cluster scRNA-seq data have been proposed, they still fail in elucidating the intrinsic properties of cells and genes. Here, we present a novel end-to-end deep…

Cited by 0SourcePDFScholar
2023

Unsupervised Deep Embedded Fusion Representation of Single-Cell Transcriptomics

AAAI 2023technical

Cell clustering is a critical step in analyzing single-cell RNA sequencing (scRNA-seq) data, which allows us to characterize the cellular heterogeneity of transcriptional profiling at the single-cell level. Single-cell deep embedded representation models have recently become popular since they can l…

Cited by 5SourcePDFScholar
2022

ZINB-Based Graph Embedding Autoencoder for Single-Cell RNA-Seq Interpretations

AAAI 2022technical

Single-cell RNA sequencing (scRNA-seq) provides high-throughput information about the genome-wide gene expression levels at the single-cell resolution, bringing a precise understanding on the transcriptome of individual cells. Unfortunately, the rapidly growing scRNA-seq data and the prevalence of d…

Cited by 74SourcePDFScholar