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Yoshihiro Yamanishi

4 accepted papers

2025

InstGAN: Instant Actor-Critic-Driven GAN for De Novo Molecule Generation and Property Optimization

IJCAI 2025

Deep generative models, such as generative adversarial networks (GANs), have been employed for de~novo molecular generation in drug discovery. Most prior studies have utilized reinforcement learning (RL) algorithms, particularly Monte Carlo tree search (MCTS), to handle the discrete nature of molecu

2024

GxVAEs: Two Joint VAEs Generate Hit Molecules from Gene Expression Profiles

AAAI 2024technical

The de novo generation of hit-like molecules that show bioactivity and drug-likeness is an important task in computer-aided drug discovery. Although artificial intelligence can generate molecules with desired chemical properties, most previous studies have ignored the influence of disease-related ce…

2024

TenGAN: Pure Transformer Encoders Make an Efficient Discrete GAN for De Novo Molecular Generation

AISTATS 2024poster

Deep generative models for de novo molecular generation using discrete data, such as the simplified molecular-input line-entry system (SMILES) strings, have attracted widespread attention in drug design. However, training instability often plagues generative adversarial networks (GANs), leading to p…

2022

Transformer-based Objective-reinforced Generative Adversarial Network to Generate Desired Molecules

IJCAI 2022poster

Deep generative models of sequence-structure data have attracted widespread attention in drug discovery. However, such models cannot fully extract the semantic features of molecules from sequential representations. Moreover, mode collapse reduces the diversity of the generated molecules. This paper…

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