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Dirk Husmeier

4 accepted papers

2018

Multiphase MCMC Sampling for Parameter Inference in Nonlinear Ordinary Differential Equations

AISTATS 2018poster

Traditionally, ODE parameter inference relies on solving the system of ODEs and assessing fit of the estimated signal with the observations. However, nonlinear ODEs often do not permit closed form solutions. Using numerical methods to solve the equations results in prohibitive computational costs, p…

Cited by 0SourcePDFScholar
2016

Fast Parameter Inference in Nonlinear Dynamical Systems using Iterative Gradient Matching

ICML 2016poster

Parameter inference in mechanistic models of coupled differential equations is a topical and challenging problem. We propose a new method based on kernel ridge regression and gradient matching, and an objective function that simultaneously encourages goodness of fit and penalises inconsistencies wit…

Cited by 34SourcePDFScholar