4 accepted papers
Natural language has been extensively used for modeling text-attributed graphs with LLMs. Natural language is used to describe the graph for LLMs to understand or serve as component of the graph, e.g., textual attributes for embedding generation. However, natural language is inherently redundant and…
Generating novel enzymes for target molecules in zero-shot scenarios is a fundamental challenge in biomaterial synthesis and chemical production. Without known enzymes for a target molecule, training generative models becomes difficult due to the lack of direct supervision. To address this, we propo…
Text-attributed graphs (TAGs) are prevalent in various real-world applications, including academic networks, e-commerce platforms, and social networks. Effective learning on TAGs requires leveraging both textual node features and structural graph information. While language models (LMs) excel at pro…
Modeling text-attributed graphs is a well-known problem due to the difficulty of capturing both the text attribute and the graph structure effectively. Existing models often focus on either the text attribute or the graph structure, potentially neglecting the other aspect. This is primarily because…