13 accepted papers
Accurately modeling the relationship between perturbations, transcriptional responses, and phenotypic changes is essential for building an AI Virtual Cell (AIVC). However, existing methods typically constrained to modeling direct associations, such as *Perturbation -> RNA* or *Perturbation -> Morpho
Modeling the nonlinear dynamics of neuronal populations represents a key pursuit in computational neuroscience. Recent research has increasingly focused on jointly modeling neural activity and behavior to unravel their interconnections. Despite significant efforts, these approaches often necessitate…
Whole slide image (WSI) analysis presents significant computational challenges due to the massive number of patches in gigapixel images. While transformer architectures excel at modeling long-range correlations through self-attention, their quadratic computational complexity makes them impractical f…
Few-shot learning presents a critical solution for cancer diagnosis in computational pathology (CPath), addressing fundamental limitations in data availability, particularly the scarcity of expert annotations and patient privacy constraints. A key challenge in this paradigm stems from the inherent d…
In computational neuroscience, models representing single-neuron in-vivo activity have become essential for understanding the functional identities of individual neurons. These models, such as implicit representation methods based on Transformer architectures, contrastive learning frameworks, and va…
Maintaining comprehensive and up-to-date knowledge graphs (KGs) is critical for modern AI systems, but manual curation struggles to scale with the rapid growth of scientific literature. This paper presents KARMA, a novel framework employing multi-agent large language models (LLMs) to automate KG enr…
Gene regulatory network (GRN) inference serves as a cornerstone for deciphering cellular decision-making processes. Early approaches rely exclusively on gene expression data, thus their predictive power remain fundamentally constrained by the vast combinatorial space of potential gene-gene interacti…
The Platonic Representation Hypothesis posits that behind different modalities of data (what we sense or detect), there exists a universal, modality-independent representation of reality. Inspired by this, we treat each neuron as a system, where we can detect the neuron’s multi-segment activity data…
Existing medical RAG systems mainly leverage knowledge from medical knowledge bases, neglecting the crucial role of experiential knowledge derived from similar patient cases - a key component of human clinical reasoning. To bridge this gap, we propose DoctorRAG, a RAG framework that emulates doctor-…
Multimodal knowledge graphs incorporate multimodal information rather than pure symbols, which significantly enhance the representation of knowledge graphs and their capacity to understand the world. Despite these advancements, existing multimodal fusion techniques still face significant challenges…
Effective urban management, renewal, and development rely on identifying low-quality areas within the city. However, previous studies have been limited by low-volume handcraft surveys and a dearth of data sources, making it difficult to understand human perception within the urban environment. In th…
Researches using margin based comparison loss demonstrate the effectiveness of penalizing the distance between face feature and their corresponding class centers. Despite their popularity and excellent performance, they do not explicitly encourage the generic embedding learning for an open set recog…
Contexts are crucial for action recognition in video. Current methods often mine contexts after extracting hierarchical local features and focus on their high-order encodings. This paper instead explores contexts as early as possible and leverages their evolutions for action recognition. In particul…