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Chenyi Zi

4 accepted papers

2026

Learning the Interaction Prior for Protein-Protein Interaction Prediction: A Model-Agnostic Approach

ICML 2026poster

Protein-protein interactions (PPIs) are fundamental to cellular function, disease mechanisms, and drug discovery. Current learning-based PPI predictors focus on learning powerful protein representations but neglect designing specialized classification heads. They mainly rely on generic aggregating m…

Cited by 0SourceScholar
2024

Deep Reinforcement Learning for Modelling Protein Complexes

ICLR 2024poster

Structure prediction of large protein complexes (a.k.a., protein multimer mod- elling, PMM) can be achieved through the one-by-one assembly using provided dimer structures and predicted docking paths. However, existing PMM methods struggle with vast search spaces and generalization challenges: (1) T…

Cited by 1SourcePDFScholar
2024

ProG: A Graph Prompt Learning Benchmark

NeurIPS 2024poster

Artificial general intelligence on graphs has shown significant advancements across various applications, yet the traditional `Pre-train \& Fine-tune' paradigm faces inefficiencies and negative transfer issues, particularly in complex and few-shot settings. Graph prompt learning emerges as a promisi…

2024

UniGAD: Unifying Multi-level Graph Anomaly Detection

NeurIPS 2024poster

Graph Anomaly Detection (GAD) aims to identify uncommon, deviated, or suspicious objects within graph-structured data. Existing methods generally focus on a single graph object type (node, edge, graph, etc.) and often overlook the inherent connections among different object types of graph anomalies.…