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Chenyi Zi

4 accepted papers

2026

Learning the Interaction Prior for Protein-Protein Interaction Prediction: A Model-Agnostic Approach

ICML 2026poster

Protein-protein interactions (PPIs) are fundamental to cellular function, disease mechanisms, and drug discovery. Current learning-based PPI predictors focus on learning powerful protein representations but neglect designing specialized classification heads. They mainly rely on generic aggregating m…

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2024

Deep Reinforcement Learning for Modelling Protein Complexes

ICLR 2024poster

Structure prediction of large protein complexes (a.k.a., protein multimer mod- elling, PMM) can be achieved through the one-by-one assembly using provided dimer structures and predicted docking paths. However, existing PMM methods struggle with vast search spaces and generalization challenges: (1) T…

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2024

ProG: A Graph Prompt Learning Benchmark

NeurIPS 2024poster

Artificial general intelligence on graphs has shown significant advancements across various applications, yet the traditional `Pre-train \& Fine-tune' paradigm faces inefficiencies and negative transfer issues, particularly in complex and few-shot settings. Graph prompt learning emerges as a promisi…

2024

UniGAD: Unifying Multi-level Graph Anomaly Detection

NeurIPS 2024poster

Graph Anomaly Detection (GAD) aims to identify uncommon, deviated, or suspicious objects within graph-structured data. Existing methods generally focus on a single graph object type (node, edge, graph, etc.) and often overlook the inherent connections among different object types of graph anomalies.…