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Rob Brekelmans

16 accepted papers

2026

Scalable Spatio-Temporal SE(3) Diffusion for Long-Horizon Protein Dynamics

ICLR 2026poster

Molecular dynamics (MD) simulations remain the gold standard for studying protein dynamics, but their computational cost limits access to biologically relevant timescales. Recent generative models have shown promise in accelerating simulations, yet they struggle with long-horizon generation due to a…

Cited by 0SourceScholar
2025

Feynman-Kac Correctors in Diffusion: Annealing, Guidance, and Product of Experts

ICML 2025spotlight

While score-based generative models are the model of choice across diverse domains, there are limited tools available for controlling inference-time behavior in a principled manner, e.g. for composing multiple pretrained models. Existing classifier-free guidance methods use a simple heuristic to mix…

2025

Reducing the Probability of Undesirable Outputs in Language Models Using Probabilistic Inference

NeurIPS 2025poster

Reinforcement learning (RL) has become a predominant technique to align language models (LMs) with human preferences or promote outputs which are deemed to be desirable by a given reward function. Standard RL approaches optimize average reward, while methods explicitly focused on reducing the probab…

Cited by 0SourceScholar
2024

A Computational Framework for Solving Wasserstein Lagrangian Flows

ICML 2024poster

The dynamical formulation of the optimal transport can be extended through various choices of the underlying geometry (*kinetic energy*), and the regularization of density paths (*potential energy*). These combinations yield different variational problems (*Lagrangians*), encompassing many variation…

2024

Doob's Lagrangian: A Sample-Efficient Variational Approach to Transition Path Sampling

NeurIPS 2024spotlight

Rare event sampling in dynamical systems is a fundamental problem arising in the natural sciences, which poses significant computational challenges due to an exponentially large space of trajectories. For settings where the dynamical system of interest follows a Brownian motion with known drift, the…

2024

Probabilistic Inference in Language Models via Twisted Sequential Monte Carlo

ICML 2024oral

Numerous capability and safety techniques of Large Language Models (LLMs), including RLHF, automated red-teaming, prompt engineering, and infilling, can be cast as sampling from an unnormalized target distribution defined by a given reward or potential function over the full sequence. In this work,…

2023

Action Matching: Learning Stochastic Dynamics from Samples

ICML 2023poster

Learning the continuous dynamics of a system from snapshots of its temporal marginals is a problem which appears throughout natural sciences and machine learning, including in quantum systems, single-cell biological data, and generative modeling. In these settings, we assume access to cross-sectiona…

2022

Improving Mutual Information Estimation with Annealed and Energy-Based Bounds

ICLR 2022poster

Mutual information (MI) is a fundamental quantity in information theory and machine learning. However, direct estimation of MI is intractable, even if the true joint probability density for the variables of interest is known, as it involves estimating a potentially high-dimensional log partition fun…

2021

q-Paths: Generalizing the geometric annealing path using power means

UAI 2021poster

Many common machine learning methods involve the geometric annealing path, a sequence of intermediate densities between two distributions of interest constructed using the geometric average. While alternatives such as the moment-averaging path have demonstrated performance gains in some settings, th…

2020

All in the Exponential Family: Bregman Duality in Thermodynamic Variational Inference

ICML 2020poster

The recently proposed Thermodynamic Variational Objective (TVO) leverages thermodynamic integration to provide a family of variational inference objectives, which both tighten and generalize the ubiquitous Evidence Lower Bound (ELBO). However, the tightness of TVO bounds was not previously known, an…

2020

Gaussian Process Bandit Optimization of the Thermodynamic Variational Objective

NeurIPS 2020poster

Achieving the full promise of the Thermodynamic Variational Objective (TVO), a recently proposed variational inference objective that lower-bounds the log evidence via one-dimensional Riemann integration, requires choosing a ``schedule'' of sorted discretization points. This paper introduces a besp…

2019

Exact Rate-Distortion in Autoencoders via Echo Noise

NeurIPS 2019poster

Compression is at the heart of effective representation learning. However, lossy compression is typically achieved through simple parametric models like Gaussian noise to preserve analytic tractability, and the limitations this imposes on learning are largely unexplored. Further, the Gaussian prior…

2018

Invariant Representations without Adversarial Training

NeurIPS 2018poster

Representations of data that are invariant to changes in specified factors are useful for a wide range of problems: removing potential biases in prediction problems, controlling the effects of covariates, and disentangling meaningful factors of variation. Unfortunately, learning representations that…

Cited by 264SourcePDFScholar