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Thomas PIERROT

7 accepted papers

2026

Bimodal masked language modeling for bulk RNA-seq and DNA methylation representation learning

ICML 2026poster

Oncologists are increasingly relying on multiple modalities to model the complexity of diseases. Within this landscape, transcriptomic and epigenetic data have proven to be particularly instrumental and play an increasingly vital role in clinical applications. However, their integration into multimo…

Cited by 0SourceScholar
2025

Simple Guidance Mechanisms for Discrete Diffusion Models

ICLR 2025poster

Diffusion models for continuous data gained widespread adoption owing to their high quality generation and control mechanisms. However, controllable diffusion on discrete data faces challenges given that continuous guidance methods do not directly apply to discrete diffusion. Here, we provide a stra…

2024

Multi-modal Transfer Learning between Biological Foundation Models

NeurIPS 2024poster

Biological sequences encode fundamental instructions for the building blocks of life, in the form of DNA, RNA, and proteins. Modeling these sequences is key to understand disease mechanisms and is an active research area in computational biology. Recently, Large Language Models have shown great prom…

Cited by 3SourcePDFScholar
2023

Neuroevolution is a Competitive Alternative to Reinforcement Learning for Skill Discovery

ICLR 2023top-25%

Deep Reinforcement Learning (RL) has emerged as a powerful paradigm for training neural policies to solve complex control tasks. However, these policies tend to be overfit to the exact specifications of the task and environment they were trained on, and thus do not perform well when conditions devia…

2022

Fast Population-Based Reinforcement Learning on a Single Machine

ICML 2022spotlight

Training populations of agents has demonstrated great promise in Reinforcement Learning for stabilizing training, improving exploration and asymptotic performance, and generating a diverse set of solutions. However, population-based training is often not considered by practitioners as it is perceive…

2019

Learning Compositional Neural Programs with Recursive Tree Search and Planning

NeurIPS 2019spotlight

We propose a novel reinforcement learning algorithm, AlphaNPI, that incorpo- rates the strengths of Neural Programmer-Interpreters (NPI) and AlphaZero. NPI contributes structural biases in the form of modularity, hierarchy and recursion, which are helpful to reduce sample complexity, improve general…