4 accepted papers
While widespread, Transformers lack inductive biases for geometric symmetries common in science and computer vision. Existing equivariant methods often sacrifice the efficiency and flexibility that make Transformers so effective through complex, computationally intensive designs. We introduce the Pl…
We introduce vector diffusion wavelets (VDWs), a novel family of wavelets inspired by the vector diffusion maps algorithm that was introduced to analyze data lying in the tangent bundle of a Riemannian manifold. We show that these wavelets may be effectively incorporated into a family of geometric g…
Frontier large language models (LLMs) have shown great success in text modeling and generation tasks across domains. However, natural language exhibits inherent semantic hierarchies and nuanced geometric structure, which current LLMs do not capture completely owing to their reliance on Euclidean ope…
Computational RNA design tasks are often posed as inverse problems, where sequences are designed based on adopting a single desired secondary structure without considering 3D conformational diversity. We introduce gRNAde, a geometric RNA design pipeline operating on 3D RNA backbones to design sequen…